Id: acc1138
Group: 2sens
Protein: c-Raf
Gene Symbol: MYC
Protein Id: P01106
Protein Name: MYC_HUMAN
PTM: phosphorylation
Site: Ser259
Site Sequence: PEPLVLHEETPPTTSSDSEEE
Disease Category: Cancer
Disease: Hepatocellular Carcinoma
Disease Subtype:
Disease Cellline: Hep3B
Disease Info:
Drug: vitamin K1 + sorafenib
Drug Info: "Sorafenib is an oral multikinase inhibitor developed by Bayer Pharmaceuticals, approved by the FDA in 2005, and used for the treatment of advanced renal cell carcinoma, hepatocellular carcinoma, and radioactive iodine-refractory differentiated thyroid cancer. Vitamin K1: - "
Effect: modulate
Effect Info: "The combined use of vitamin K1 and sorafenib enhances the phosphorylation of c-Raf at Ser-43 and Ser-259 sites. It also promotes the phosphorylation of c-Met at Tyr-1349 site, thereby enhancing the inhibitory effect on the growth of tumor cells."
Note:
Score: 4.0
Pubmed(PMID): 21734462
Sentence Index:
Sentence:

Sequence & Structure:

MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLRNSCA

Select PDB:

Known Drugs:

source: Multi-Sources

(see table)

No data.

Protein Tractability:

source: Open Targets
Small molecule
Antibody
PROTAC
Other modalities
Approved Drug
Advanced Clinical
Phase 1 Clinical
Structure with Ligand
High-Quality Ligand
High-Quality Pocket
Med-Quality Pocket
Druggable Family
Approved Drug
Advanced Clinical
Phase 1 Clinical
UniProt loc high conf
GO CC high conf
UniProt loc med conf
UniProt SigP or TMHMM
GO CC med conf
Human Protein Atlas loc
Approved Drug
Advanced Clinical
Phase 1 Clinical
Literature
UniProt Ubiquitination
Database Ubiquitination
Half-life Data
Small Molecule Binder
Approved Drug
Advanced Clinical
Phase 1 Clinical

PTM Intensity:

source: CPTAC

No intensity data of this site,
show all other sites!

MYC-Ser176
Cancer Intensity
BRCA
COAD 0.707
HGSC -0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser362
Cancer Intensity
BRCA 1.131
COAD -0.769
HGSC -0.362
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser363
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser76
Cancer Intensity
BRCA -1.857
COAD
HGSC
ccRCC 0.134
GBM 1.257
HNSC 0.736
LUAD -0.146
LUSC -0.348
non_ccRCC
PDAC -0.678
UCEC 0.902
MYC-Ser77
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser78
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.707
GBM
HNSC 0.707
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser79
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYC-Ser85
Cancer Intensity
BRCA -0.711
COAD
HGSC
ccRCC -0.963
GBM 1.12
HNSC 0.547
LUAD 0.557
LUSC 0.268
non_ccRCC
PDAC -1.693
UCEC 0.875
MYC-Thr72
Cancer Intensity
BRCA -1.784
COAD
HGSC
ccRCC 0.003
GBM 0.708
HNSC 0.829
LUAD 0.713
LUSC -0.945
non_ccRCC
PDAC
UCEC 0.475
MYC-Thr73
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser1624
Cancer Intensity
BRCA
COAD -0.752
HGSC 1.135
ccRCC
GBM
HNSC -0.383
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser178
Cancer Intensity
BRCA
COAD -0.144
HGSC
ccRCC -0.849
GBM 1.719
HNSC -0.67
LUAD -0.863
LUSC -0.269
non_ccRCC 1.225
PDAC -0.948
UCEC 0.798
MYCBP2-Ser181
Cancer Intensity
BRCA -0.869
COAD -0.244
HGSC
ccRCC 0.166
GBM -0.535
HNSC -0.377
LUAD -0.506
LUSC 0.606
non_ccRCC 2.493
PDAC -0.926
UCEC 0.191
MYCBP2-Ser183
Cancer Intensity
BRCA -0.876
COAD -0.193
HGSC
ccRCC 0.16
GBM -0.541
HNSC -0.383
LUAD -0.512
LUSC 0.602
non_ccRCC 2.49
PDAC -0.933
UCEC 0.186
MYCBP2-Ser2061
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM 0.707
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC -0.707
MYCBP2-Ser2319
Cancer Intensity
BRCA -0.268
COAD 0.094
HGSC 2.875
ccRCC -0.158
GBM -0.15
HNSC -0.451
LUAD -0.041
LUSC -0.033
non_ccRCC -0.994
PDAC -0.308
UCEC -0.564
MYCBP2-Ser2353
Cancer Intensity
BRCA
COAD 2.183
HGSC
ccRCC 0.093
GBM -1.324
HNSC 0.006
LUAD -0.034
LUSC -1
non_ccRCC -0.531
PDAC 0.237
UCEC 0.37
MYCBP2-Ser2681
Cancer Intensity
BRCA
COAD
HGSC -0.72
ccRCC
GBM -0.996
HNSC 0.762
LUAD 0.953
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2687
Cancer Intensity
BRCA
COAD -0.694
HGSC -1.476
ccRCC 0.435
GBM 0.479
HNSC 0.156
LUAD -0.626
LUSC 1.243
non_ccRCC -0.296
PDAC 1.725
UCEC -0.947
MYCBP2-Ser2741
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.209
GBM
HNSC -0.62
LUAD -1.073
LUSC
non_ccRCC 1.429
PDAC -0.56
UCEC 1.033
MYCBP2-Ser2787
Cancer Intensity
BRCA -1.819
COAD -1.111
HGSC
ccRCC 0.083
GBM 1.468
HNSC -0.15
LUAD -0.288
LUSC 0.827
non_ccRCC
PDAC 0.582
UCEC 0.408
MYCBP2-Ser2789
Cancer Intensity
BRCA -1.309
COAD -0.459
HGSC 2.583
ccRCC -0.065
GBM 0.597
HNSC -0.522
LUAD -0.459
LUSC 0.225
non_ccRCC -0.703
PDAC 0.13
UCEC -0.017
MYCBP2-Ser2812
Cancer Intensity
BRCA
COAD -0.702
HGSC 0.155
ccRCC -1.492
GBM 0.248
HNSC -0.018
LUAD
LUSC
non_ccRCC 1.939
PDAC 0.397
UCEC -0.527
MYCBP2-Ser2832
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.707
GBM
HNSC 0.707
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2833
Cancer Intensity
BRCA
COAD -0.383
HGSC -1.258
ccRCC
GBM 1.503
HNSC 0.063
LUAD
LUSC
non_ccRCC
PDAC
UCEC 0.075
MYCBP2-Ser2839
Cancer Intensity
BRCA
COAD 0.8
HGSC -1.121
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC 0.321
MYCBP2-Ser2844
Cancer Intensity
BRCA 0.707
COAD -0.707
HGSC
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2871
Cancer Intensity
BRCA -1.273
COAD -0.949
HGSC 2.278
ccRCC -0.119
GBM -0.564
HNSC -0.402
LUAD -0.032
LUSC 1.144
non_ccRCC 0.426
PDAC 0.044
UCEC -0.552
MYCBP2-Ser2873
Cancer Intensity
BRCA
COAD -0.453
HGSC 1.478
ccRCC
GBM
HNSC -0.305
LUAD -0.719
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2911
Cancer Intensity
BRCA
COAD
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC -0.707
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2920
Cancer Intensity
BRCA -0.286
COAD -0.83
HGSC 1.009
ccRCC -0.555
GBM 2.236
HNSC -0.47
LUAD
LUSC -1.036
non_ccRCC 0.58
PDAC -0.503
UCEC -0.144
MYCBP2-Ser2930
Cancer Intensity
BRCA
COAD
HGSC -0.707
ccRCC
GBM
HNSC
LUAD 0.707
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser2985
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM
HNSC -0.707
LUAD
LUSC
non_ccRCC
PDAC
UCEC 0.707
MYCBP2-Ser342
Cancer Intensity
BRCA
COAD -0.865
HGSC
ccRCC
GBM
HNSC 1.095
LUAD -0.229
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser3426
Cancer Intensity
BRCA
COAD -0.707
HGSC
ccRCC
GBM
HNSC
LUAD 0.707
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Ser3478
Cancer Intensity
BRCA
COAD 0.205
HGSC 1.554
ccRCC
GBM -0.615
HNSC 1.15
LUAD
LUSC 0.034
non_ccRCC -0.377
PDAC -0.344
UCEC -1.607
MYCBP2-Ser3505
Cancer Intensity
BRCA -0.528
COAD 0.4
HGSC 2.452
ccRCC -0.586
GBM -0.753
HNSC 0.081
LUAD 0.235
LUSC 0.861
non_ccRCC -0.296
PDAC -0.953
UCEC -0.915
MYCBP2-Ser3519
Cancer Intensity
BRCA
COAD -0.9
HGSC 1.685
ccRCC
GBM
HNSC 0.596
LUAD -0.267
LUSC -0.165
non_ccRCC
PDAC
UCEC -0.948
MYCBP2-Ser3931
Cancer Intensity
BRCA -0.456
COAD
HGSC
ccRCC 0.891
GBM -0.526
HNSC -0.342
LUAD 1.751
LUSC 0.608
non_ccRCC -1.652
PDAC 0.312
UCEC -0.585
MYCBP2-Ser3932
Cancer Intensity
BRCA -0.176
COAD
HGSC -1.779
ccRCC 0.869
GBM -0.515
HNSC -0.088
LUAD 1.536
LUSC 0.649
non_ccRCC -1.186
PDAC 0.765
UCEC -0.075
MYCBP2-Ser3944
Cancer Intensity
BRCA
COAD
HGSC
ccRCC 0.635
GBM
HNSC
LUAD 0.518
LUSC -1.153
non_ccRCC
PDAC
UCEC
MYCBP2-Ser899
Cancer Intensity
BRCA -1.776
COAD
HGSC
ccRCC 0.802
GBM
HNSC
LUAD 0.503
LUSC -0.444
non_ccRCC
PDAC 0.866
UCEC 0.048
MYCBP2-Thr1625
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Thr2058
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM 0.707
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC -0.707
MYCBP2-Thr2344
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.636
GBM
HNSC 1.153
LUAD -0.516
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Thr2347
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.707
GBM
HNSC 0.707
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Thr2683
Cancer Intensity
BRCA
COAD -0.322
HGSC 1.836
ccRCC 0.059
GBM -0.907
HNSC 0.32
LUAD -0.883
LUSC 0.739
non_ccRCC 0.557
PDAC 0.295
UCEC -1.695
MYCBP2-Thr2880
Cancer Intensity
BRCA
COAD 0.707
HGSC -0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Thr3508
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Thr3921
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM -0.707
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC 0.707
MYCBP2-Thr3943
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.707
GBM
HNSC
LUAD 0.707
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Tyr3477
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCBP2-Tyr3484
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCN-Ser352
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM
HNSC
LUAD 0.707
LUSC -0.707
non_ccRCC
PDAC
UCEC
MYCN-Ser355
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM
HNSC
LUAD 0.707
LUSC -0.707
non_ccRCC
PDAC
UCEC
MYCN-Ser361
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM
HNSC
LUAD 0.707
LUSC -0.707
non_ccRCC
PDAC
UCEC
MYCN-Thr58
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM
HNSC
LUAD 0.707
LUSC -0.707
non_ccRCC
PDAC
UCEC
MYCT1-Ser115
Cancer Intensity
BRCA
COAD -0.766
HGSC 1.131
ccRCC
GBM
HNSC
LUAD -0.365
LUSC
non_ccRCC
PDAC
UCEC
MYCT1-Ser129
Cancer Intensity
BRCA
COAD 1.033
HGSC 0.388
ccRCC 0.202
GBM
HNSC -0.325
LUAD -0.216
LUSC -1.956
non_ccRCC
PDAC 0.874
UCEC
MYCT1-Ser135
Cancer Intensity
BRCA 0.542
COAD 0.75
HGSC 0.574
ccRCC 0.064
GBM 1.358
HNSC 1.25
LUAD -0.087
LUSC -0.849
non_ccRCC -0.867
PDAC -1.066
UCEC -1.67
MYCT1-Ser138
Cancer Intensity
BRCA
COAD
HGSC 1.696
ccRCC -0.48
GBM
HNSC -0.812
LUAD 0.734
LUSC -1.023
non_ccRCC -1.043
PDAC 0.718
UCEC 0.209
MYCT1-Ser141
Cancer Intensity
BRCA
COAD
HGSC
ccRCC -0.047
GBM
HNSC
LUAD 1.444
LUSC -0.582
non_ccRCC -1.196
PDAC
UCEC 0.381
MYCT1-Ser149
Cancer Intensity
BRCA 1.23
COAD -0.234
HGSC 2.256
ccRCC 0.036
GBM 0.337
HNSC -0.079
LUAD -0.751
LUSC -0.325
non_ccRCC -0.535
PDAC -0.527
UCEC -1.409
MYCT1-Ser155
Cancer Intensity
BRCA
COAD -0.233
HGSC 1.679
ccRCC -0.048
GBM
HNSC
LUAD
LUSC -0.429
non_ccRCC
PDAC
UCEC -0.969
MYCT1-Thr143
Cancer Intensity
BRCA
COAD
HGSC 0.567
ccRCC 0.377
GBM
HNSC 1.004
LUAD -0.413
LUSC
non_ccRCC
PDAC
UCEC -1.535
MYCT1-Thr219
Cancer Intensity
BRCA
COAD -0.707
HGSC 0.707
ccRCC
GBM
HNSC
LUAD
LUSC
non_ccRCC
PDAC
UCEC
MYCT1-Tyr116
Cancer Intensity
BRCA
COAD
HGSC
ccRCC
GBM 0.707
HNSC
LUAD -0.707
LUSC
non_ccRCC
PDAC
UCEC
MYCT1-Tyr126
Cancer Intensity
BRCA
COAD
HGSC
ccRCC 0.351
GBM
HNSC -1.128
LUAD 0.778
LUSC
non_ccRCC
PDAC
UCEC

PTM-Disease Association:

source: PTMD
Residue Position State Disease Class PMID
T 58 A T-cell acute lymphoblastic leukemia Phosphorylation 32049046
- - A T-cell acute lymphoblastic leukemia Ubiquitination 32049046
S 62 A Cancer Phosphorylation 32188705
T 58 D Papillary adenoma Phosphorylation 17192266
T 58 D Squamous cell carcinoma Phosphorylation 32895364
S 62 D Medulloblastoma Phosphorylation 36765089
T 58 D Triple-negative breast cancer Phosphorylation 33541412
T 58 D Acute myeloid leukemia/acute myelogenous leukemia Phosphorylation 17192266
T 58 D Breast cancer/tumor/carcinoma Phosphorylation 17192266
T 58 D Hepatocellular carcinoma/hepatocarcinoma/hepatoma Phosphorylation 17192266
T 58 D Islet cell carcinoma Phosphorylation 17192266
T 58 D Osteogenic sarcoma/osteosarcoma Phosphorylation 17192266
T 58 D Cancer Phosphorylation 36639831
T 58 D T-cell lymphoma Phosphorylation 17192266
- - D Non-small cell lung cancer Ubiquitination 35598017
- - D Esophageal squamous cell carcinoma Ubiquitination 35593463
- - D Bladder cancer Ubiquitination 37105989
- - D Colorectal cancer Ubiquitination 37212463
- - D Colorectal cancer Ubiquitination 32796813
- - D Osteosarcoma Ubiquitination 36803784
T 58 D Neuroblastoma Phosphorylation 37973789
T 58 D Breast cancer Phosphorylation 21808024
T 58 D AIDS-related lymphoma Phosphorylation 17310999
T 58 D Acute myeloid leukemia/acute myelogenous leukemia Phosphorylation 10488335
T 58 N Cervical cancer/carcinoma Phosphorylation 15150404
T 58 P B-cell lymphoma Phosphorylation 10706881
- - P Cervical cancer/carcinoma Ubiquitination 15150404
S 62 P Acute myeloid leukemia/acute myelogenous leukemia Phosphorylation 10488335
S 62 P Breast cancer/tumor/carcinoma Phosphorylation 22307329
S 62 P T-cell lymphoma Phosphorylation 10488335
- - P Breast cancer Ubiquitination 35296795
- - P Retinoblastoma Ubiquitination 34761308
S 67 P T-cell acute lymphoblastic leukemia Phosphorylation 32049046
S 373 P Prostate cancer/carcinoma/adenocarcinoma Phosphorylation 23550155
S 62 P Lung cancer Phosphorylation 33552953
T 58 P Burkitt lymphoma Phosphorylation 10713166 10866684
S 67 U Cancer Phosphorylation 33461590
- - U Anaplastic thyroid cancer Acetylation 30400007
T 58 U Acute myeloid leukemia/acute myelogenous leukemia Phosphorylation 10488335 17192266
T 58 U Breast cancer/tumor/carcinoma Phosphorylation 11175856 17192266
T 58 U Hepatocellular carcinoma/hepatocarcinoma/hepatoma Phosphorylation 15455033 17192266
S 62 U Acute myeloid leukemia/acute myelogenous leukemia Phosphorylation 17192266
S 62 U B-cell lymphoma Phosphorylation 15095297 17192266
- - U Hepatocellular carcinoma Ubiquitination 36481361
- - U Colorectal cancer Ubiquitination 34109174
- - U Triple-negative breast cancer Ubiquitination 36528490
T 58 U Islet cell carcinoma Phosphorylation 12015982 17192266
S 62 U Chronic myelogenous leukemia/chronic myeloid leukemia Phosphorylation 16855632
- - U Gastric cancer Ubiquitination 35397617
T 58 U Osteogenic sarcoma/osteosarcoma Phosphorylation 12098700 17192266
S 71 U Cancer Phosphorylation 33461590
S 62 U T-cell lymphoma Phosphorylation 17192266
T 58 U Papillary adenoma Phosphorylation 10360173 17192266
S 62 U Colorectal cancer Phosphorylation 35039060
S 62 U Breast cancer Phosphorylation 31944568 21808024
S 62 U Hepatocellular carcinoma Phosphorylation 25893300
T 58 U T-cell lymphoma Phosphorylation 10488335 17192266
S 62 U Squamous cell carcinoma Phosphorylation 32895364
K 148 U Hepatocellular carcinoma Acetylation 37739936
Y 74 U Ovarian cancer/carcinoma Phosphorylation 23318434
S 62 U Hepatocellular carcinoma/hepatocarcinoma/hepatoma Phosphorylation 15455033 17192266
S 62 U Islet cell carcinoma Phosphorylation 17192266 12015982
S 62 U Liver cancer Phosphorylation 34758313
S 62 U Osteogenic sarcoma/osteosarcoma Phosphorylation 17192266 12098700
S 62 U Pancreatic ductal adenocarcinoma Phosphorylation 27014871
S 62 U Papillary adenoma Phosphorylation 17192266 10360173

State Note: Based on the distinct PTM states in diseases, PTMD classified all disease-associated PTMs into six classes, including whether the up-regulation (U) or down-regulation (D) of PTM levels, the absence (A) or presence (P) of PTMs, and the creation (C) or disruption (N) of PTM sites are associated with diseases.

PTM-Drug Perturbation Response:

source: DecryptM

No data.

Function score:

source: funscoR

No data.

Cross Links: